CDS

Accession Number TCMCG010C35075
gbkey CDS
Protein Id XP_016548478.1
Location join(5413782..5414093,5414142..5414209,5414300..5414561,5415791..5415924,5416046..5416181,5416377..5416430,5416575..5416724,5416802..5416953,5417051..5417135,5417232..5417504,5417663..5417809,5417937..5418092,5419092..5419159,5420558..5420680,5420813..5420912,5421014..5421126,5422304..5422576,5422668..5422868,5423261..5423354,5423439..5423510,5423974..5424072,5424247..5424369)
Gene LOC107848274
GeneID 107848274
Organism Capsicum annuum

Protein

Length 1064aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016692992.1
Definition PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category KL
Description Prokaryotic RING finger family 4
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15505        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009292        [VIEW IN EMBL-EBI]
GO:0009294        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044764        [VIEW IN EMBL-EBI]
GO:0045003        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGCGAAAAAGATTACAGATGAGCTTGTTTCGATGGTGCGTACGATTGTTGGGGATGAATATAGAGAGATGGACATAATTAGATCACTTCACATGGCGAAAAATGATCCAACAGCTGCTATAAACATCATCTTTGATACTCCGAGTTTCAAGAAAATTGAAATTCGGAATACCCGTTTGAATTCTGATGGTGGAAATGCAAGCAGTAATAGTGGTAAGATTCAAGAATCTGAGATTAGTAGAGTTTGTTCAAATGAAGGATTGGATAGTAAGAGTAGAATTGAGAGTGAATTTGGTGGTAATGGGTTGAGGGGTGGGGATGAATTTGGGGGTAGTGGGTTGTTGGGTGAGAGGGCTGGGGGCGATATAGGGACTGAGGAATGTGGGAGTAATGGGTTGGTGGGTAAGAGGGTAGGGGGCGATATGGGGAGTGAATGGTGGTATGTGGGGTGTGGTGAGGTAGCTGGTATGTCAACATGTAAAGGGAGAATTTTGAAGCCTGGTGATGAAGTTGAATTTACGTTTCCTGTCGAGAAGATGTTGAGTTCACCTTCAACTGGGAAGTTTGGTGGTGGGCGAGGGCGTCAAGCTGCTGCGTGTTCTGAAATTGTAAGGTTTTCTACTAAGGCTTGTGGAGAGATTGGGCGTATTCCAAATGAATGGGCTCGATGTATTCTGCCATTGGTGAGGGATAAGAAGATTAGAATTGAAGGATTTTGCAAATCGGCCCCTAACATATTGGGGATTATGGACTCTGTTCTTTTGTCAGTCAGAGTGTATATTAACAGTTTCATGTTTCGAAAAAGCCATCAGACATCACTAAAGGCTAGAAACAATCCCGCAGATGATACAGTTGTTCACCCCCTTCCGACTTTGTTCCATTTGCTTGGGCTTACTCCTTTTAAGAAGGCAGAATTCACTCCGTCTGATTTATACACGAGGAAGCGGCCTTTGCACGGACAGGACAGCTCCGGAGGTCCTGCCTCATTATTGCGTGCAAACTTATCCAAAAGCTCCTCATCTGCAGATGGAGATACAGTTGAGAATGAGGAGTCAATTTCTGATACCGATCTTGACTATATTGTTGGTTTAGCTGATAGCTCGGAGCTACAGGAAATGGAACCACCAAGTACGCTCCAGTGCGAACTGCGACCCTATCAGAAGCAGGCGCTTCATTGGATGACACAACTGGAGAGGGGAAGAAACATGGATGAAGCAGCAACCACTCTGCATCCATGTTGGAATGCATACTGCCTAAAAGATGAGAGGGAACTTGTTGTTTACTTGAATGCATTTTCGGGTGATGCGACCACTGAATTTCCGAGTACCCTTGAAATGGCTAGAGGAGGAATTTTGGCAGATTCCATGGGGCTAGGGAAGACTATAATGACTATATCTCTTCTCCTCAGTCGTTCTGAAAGAGGTGGATCATCAGGAAGCCAATCTACAAGTCAGCTGTCTAGTGATAATGGTGAAGCTAGTAATATCTTAAGTCAGTCTCCAACTTTTGCGAAGAAATCAGCAAAATTCTCTAGTCTTGATAAGCTTTTGAAACATAAGCCAACTCTTATCTCCGGTGGCAATCTGATTATATGTCCAATGACACTACTTGGTCAATGGAAGGCAGAGATTGAAGCCCATGCACAACCCGGGGTTCTATCTGTTTATGTTTACTATGGCCAGACAAGATCAAAGGATGCAAAAGTGCTTGCTCGAAGTGATGTCGTGCTGACGACATATGGGGTGTTGGCCTCCGAATTTTCTGCTGAGAATGCTGAGGACAGTGGGGGCCTTCTCTCTATTAGGTGGTTTAGAGTGGTGCTCGATGAGGCGCATACTATCAAATCCTCTAAAAGTCAAATCTCAAATGCTGCCTCTGCTCTTAATGCTGACCGTCGGTGGTGTCTTACTGGTACCCCTATCCAGAACAATCTGGAGGATATTTACAGTTTGCTGAGATTTTTGAGAGTCGAACCATGGGGAAGTTGGGCATGGTGGAACAAGCTTATTCAGAAACCTTTTGAGGAGGGAGATGAGAGGGGGCTAAAGTTGGTTCAATCAATACTAAGTCTGATCATGTTGAGAAGAACAAAGTCTAGCACAGATAGAGAAGGAAGACCAATTTTAGTTCTACCACCAGCAGATATTCAAGTGATATATTGTGAACTTACAGAAGTAGAGCGCGACTTCTACGATGCATTGTATAAACGATCCAAGGTGAAGTTTGATCAGTTTGTTGAGCAAGGGCGAGTTCTCCACAACTATGCTTCTATATTGGAGTTGCTATTGCGACTTCGTCAATGTTGCGACCATCCATTTCTTGTCATGAGTCGAGGTGATACTCAAGAATTCTCTGATCTAAATAAGCTTGCTAAACGTTTCCTTAAGGGTGGTAAGGAGACTGGAGAAGGCAAGGATGTCCCTTCACGTGCTTATATCCAGGAGGTTGTGGAAGAGTTGCGGAAGGGAGAACAGGGAGAATGCCCTATCTGTCTTGAAGCTTTTGAAGATGCGGTGTTGACTCCATGTGCTCATAGGTTATGTCGAGAGTGTCTCTTGGCAAGCTGGCGAAGTTCTAATTCGGGCCTTTGTCCTGTTTGTAGAAACACTGTCAGTAGGCAGGAGCTTATAACAGCACCGTCAGACAACCGCTTTCAGGTTGATGTTGAAAAGAATTGGGTGGAGTCATCAAAAGTGTCAGCCTTGTTGTCTGAATTAAAACGTCTTCGTTCTGTTGGTTCCAAAAGCATTGTTTTTAGTCAGTGGACTGCCTTCCTAGATCTACTGCAGATTCCTCTTTCTCGTAGTAGTATTCCATTTGTTCGCCTTGATGGGACGTTAAACCAACAACAACGTGAGAAAGTAATAAAGAAGTTCTCAGAAGAGGATGACATATCGGTGTTGCTAATGTCATTGAAGGCTGGTGGTGTTGGTATAAACCTGACGGCTGCATCTAATGCTTTTGTCATGGATCCATGGTGGAATCCAGCTGTTGAGGAACAAGCAGTCATGCGTGTTCATCGTATTGGACAAACTAAGCAAGTAATGATCAAACGATTCATTGTGAAGGGTTCGGTAGAGGAAAGAATGGAGGCAGTTCAAACTAGGAAGCAACGGATGATTTCTGGTGCTTTGACAGACCAAGAAGTTCGGACTGCAAGAATCGAGGAACTTAAGATGCTTTTCGCATAG
Protein:  
MAAKKITDELVSMVRTIVGDEYREMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTRLNSDGGNASSNSGKIQESEISRVCSNEGLDSKSRIESEFGGNGLRGGDEFGGSGLLGERAGGDIGTEECGSNGLVGKRVGGDMGSEWWYVGCGEVAGMSTCKGRILKPGDEVEFTFPVEKMLSSPSTGKFGGGRGRQAAACSEIVRFSTKACGEIGRIPNEWARCILPLVRDKKIRIEGFCKSAPNILGIMDSVLLSVRVYINSFMFRKSHQTSLKARNNPADDTVVHPLPTLFHLLGLTPFKKAEFTPSDLYTRKRPLHGQDSSGGPASLLRANLSKSSSSADGDTVENEESISDTDLDYIVGLADSSELQEMEPPSTLQCELRPYQKQALHWMTQLERGRNMDEAATTLHPCWNAYCLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTISLLLSRSERGGSSGSQSTSQLSSDNGEASNILSQSPTFAKKSAKFSSLDKLLKHKPTLISGGNLIICPMTLLGQWKAEIEAHAQPGVLSVYVYYGQTRSKDAKVLARSDVVLTTYGVLASEFSAENAEDSGGLLSIRWFRVVLDEAHTIKSSKSQISNAASALNADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGSWAWWNKLIQKPFEEGDERGLKLVQSILSLIMLRRTKSSTDREGRPILVLPPADIQVIYCELTEVERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRSSNSGLCPVCRNTVSRQELITAPSDNRFQVDVEKNWVESSKVSALLSELKRLRSVGSKSIVFSQWTAFLDLLQIPLSRSSIPFVRLDGTLNQQQREKVIKKFSEEDDISVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQTKQVMIKRFIVKGSVEERMEAVQTRKQRMISGALTDQEVRTARIEELKMLFA